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Index

A B C D E F G H I L M N O P R S T U W Z

a

  • Active sequence: spin
  • Align sequences: spin
  • Alignment local: spin
  • Author test:spin

    • b

  • Base composition plotting:spin

    • c

  • Changing the default number of matches: spin
  • Changing the maximum number of matches: spin
  • Changing the score matrix: spin
  • circular sequences:spin
  • Cloverleaf:spin
  • Codon composition:spin
  • Codon frequencies:spin
  • Codon tables:spin
  • Codon usage method:spin
  • Codon usage tables:spin
  • Codon usage:spin
  • Complement sequence: spin
  • Composition: sequence:spin
  • Configure: restriction enzymes: spin
  • Conserved bases in tRNA:spin
  • Copy sequence: spin
  • Crosshairs: spin
  • Cursor dragging:spin
  • Cursor linking:spin
  • Cursor positioning:spin
  • Cursor: spin
  • Cutting sites: restriction enzymes:spin

    • d

  • Delete sequence: spin
  • Dinucleotide frequencies:spin
  • Display interaction:spin
  • DNA character set
  • DNA translation:spin
  • Dot plot: spin
  • Double stranded sequence listing:spin
  • Drag and drop graphics: spin
  • Dumping results to file:spin
  • Duplicate matches: spin

    • e

  • EMBOSS
  • Entry sequence: spin
  • Expected number of matches in spin

    • f

  • feature tables
  • Find best diagonals: spin
  • Find matching words: spin
  • Find open reading frames:spin
  • Find similar spans: spin
  • Finding genes: Introduction:spin
  • Finding protein genes:spin
  • Finding strings:spin
  • Format of protein score matrix

    • g

  • Gene finding: Introduction:spin
  • Genetic code:spin
  • Get sequence: spin
  • Graphics rearrangement: spin

    • h

  • Hide duplicate matches: spin

    • i

  • Interaction of displays:spin
  • Interconvert t and u: spin
  • Intron in tRNA:spin
  • Intron/exon boundaries:spin
  • IUB symbols:spin

    • l

  • Load sequence: spin
  • Local alignment: spin

    • m

  • Match probabilities in spin
  • Matching strings:spin
  • Memory saving: spin
  • Memory saving:spin
  • Memory usage:spin
  • Motif searching: percentage matches:spin
  • Motif searching:spin
  • motifs: spin

    • n

  • NC-IUB symbols:spin
  • Normalisation: codon usage tables:spin
  • Nucleotide symbols

    • o

  • Oligo searching:spin
  • Open reading frames:spin

    • p

  • Percentage matches:spin
  • Persistence of results:spin
  • Personal search: spin
  • Plotting base composition:spin
  • Probabilities in spin
  • protein alignment symbols: spin
  • Protein score matrix format
  • Protein:spin

    • r

  • Range: spin
  • Read sequence: spin
  • Reading frame:spin
  • Restriction enzyme sites:spin
  • Restriction enzymes: configuring: spin
  • Restriction enzymes: examining the plot: spin
  • Restriction enzymes: introduction: spin
  • Restriction enzymes: selecting enzymes: spin
  • Restriction site listing:spin
  • Restriction site printing:spin
  • Results manager: spin
  • Rotate sequence: spin

    • s

  • Save sequence: spin
  • Score matrix format
  • Scramble sequence: spin
  • Searching for motifs:spin
  • Searching for oligos:spin
  • Searching for strings:spin
  • Searching: motifs:spin
  • Searching: open reading frames:spin
  • Searching: protein genes:spin
  • Searching: splice sites:spin
  • Searching: start codons:spin
  • Searching: stop codons:spin
  • Searching: tRNA genes:spin
  • Searching:spin
  • Selecting a sequence: spin
  • Seq identifier: spin
  • Sequence composition:spin
  • Sequence display: spin
  • Sequence display:spin
  • Sequence interpretation: finding protein genes:spin
  • Sequence interpretation: tRNA gene search:spin
  • Sequence manager: spin
  • Sequence scrolling:spin
  • Sequence viewer:spin
  • Set genetic code:spin
  • Set the range: spin
  • Significance of matches in spin
  • Sim: spin
  • Simple search: spin
  • Single stranded sequence listing:spin
  • Sites: restriction enzymes:spin
  • Smith-Waterman: spin
  • Spin
  • SPIN Sequence Comparison Plot: spin
  • SPIN Sequence Plot: spin
  • Spin: copy sequence
  • Spin: sequence type (linear or circular)
  • Splice junctions:spin
  • Splice sites:spin
  • Start codons:spin
  • Stems and loops:spin
  • Stop codons:spin
  • String finding:spin
  • String matching:spin
  • String searching:spin
  • Subsequence searching:spin

    • t

  • Transcribe sequence: spin
  • Translate sequence: spin
  • Translation to protein:spin
  • tRNA gene search:spin
  • tRNA introns:spin

    • u

  • Uneven positional base frequencies:spin

    • w

  • Weight matrix: splice sites:spin
  • Weight matrix:spin

    • z

  • Zoom: spin

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    This page is maintained by staden-package. Last generated on 22 October 2002.
    URL: http://www.mrc-lmb.cam.ac.uk/pubseq/manual/spin_unix_49.html