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break_contig

break_contig
 -io            io_handle:integer
 -readings      identifiers:strings

This command breaks contigs into two or more pieces at given points. The function returns no value but will generate a Tcl error if an error occurs.

-io io_handle
The database IO handle returned from a previous open_db call.

-readings identifiers
This specifies the list of readings. For each reading the contig will be broken such that the reading forms the left end of a new contig.



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This page is maintained by staden-package. Last generated on 1 March 2001.
URL: http://www.mrc-lmb.cam.ac.uk/pubseq/manual/scripting_70.html