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contig_order_to_number

contig_order_to_number
 -io            io_handle:integer
 -order         position:integer

This command converts a contig position number to a contig number. That is we can ask "which is the second contig from the left". The function returns the coontig number.

-io io_handle
The database IO handle returned from a previous open_db call.
-order position
The position of the contig. "1" is the left most contig.



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URL: http://www.mrc-lmb.cam.ac.uk/pubseq/manual/scripting_63.html