phrap_assemble.p4m
minmatch
minscore
other_args
.tmp
-- temporary
fofn.assembly/fofn
fofn.assembly/phrap_stdout
fofn.assembly/phrap_stderr
fofn.contigs
fofn.contigs.qual
fofn.singlets
fofn.phrap_log
phrap: singlet
phrap: failed
SEQ
seqid: assembled
SEQ
seqid: singlet
SEQ
seqid: failed