extract_seqprogram to extract the sequence information from binary trace files, Experiment files, or from the old Staden format plain files. The output contains the sequences split onto lines of at most 60 characters each, in plain or fasta format. The input files are passed unchanged onto subsequent modules.
Output only the good sequenceoption is specified this controls whether the cosmid sequence should be considered good.
Output in fasta formatoption selected, and is useful for feeding into BLAST searches, for example. The file to write to is specified in the
File namefiled. If this option is unselected then the output is sent to separate files, one per sequence. The output files have the same name as the input files, except with an extra suffix specified in the
File name suffixfield.